Sea turtle tornovirus 1
From Wikipedia the free encyclopedia
| Sea turtle tornovirus 1 | |
|---|---|
| Virus classification | |
| Group: | Group II (ssDNA) |
| Species: | Sea turtle tornovirus 1 |
Sea turtle tornovirus 1 is a single stranded DNA virus that was isolated from a turtle with fibropapillomatosis in 2009.[1]
Virology[edit]
The genome is circular and ~1.8 kilobases in length with a G+C content of ~50%. It has at least three open reading frames (ORF 1, 2, 3) and two others (ORF 4 and 5) may also be present. The genome is of negative polarity.
ORF 1 possesses a putative nuclear localization signal at its N terminal. ORF 2 has some homology to the viral protein 2 of chicken anaemia virus. ORF 3 has no homology to any known protein. Similarly neither ORF 4 or 5 have any homology with any known protein. The functions of these proteins is not known.
A TATA box (sequence—TATAAA) and a poly adenosine signal (sequence—AATAAA) are present in the genome.
Taxonomy[edit]
The final classification of this virus has yet to be decided.
It has a low level of homology to the Circovirus chicken anemia virus.
Clinical[edit]
The virus can be isolated from the blood and all the major organs as well as the fibropapilloma.
Genome sequences[edit]
Listing: https://www.ncbi.nlm.nih.gov/nuccore?term=EU867816:EU867824[pacc]
References[edit]
- ^ Ng TF, Manire C, Borrowman K, Langer T, Ehrhart L, Breitbart M (2009) Discovery of a novel single-stranded DNA virus from a sea turtle fibropapilloma by using viral metagenomics. J Virol 83(6):2500–2509